pyFAI scripts manualΒΆ
While pyFAI is first and foremost a Python library to be used by developers, a set of scripts is provided to process a full diffraction experiment on the command line without knowing anything about Python. Those scripts can be divided into 3 categories: pre-processing tools which prepare the dataset for the calibration tool. The calibration is the determination of the geometry of the experimental setup using Debye-Scherrer rings of a reference compound (or calibrant). Finally a full dataset can be integrated using different tools targeted at different experiments.
- Pre-processing tools:
- pyFAI-drawmask: tool for drawing a mask on top of an image
- pyFAI-average: tool for averaging/median/... filtering images (i.e. for dark current)
- Calibration tools:
- pyFAI-calib: manually select the rings and refine the geometry
- pyFAI-recalib: automatic ring extraction to refine the geometry (deprecated: see “recalib” option in pyFAI-calib)
- MX-calibrate: Calibrate automatically a set of images taken at various detector distances
- check_calib: checks the calibration of an image at the sub-pixel level (deprecated: see “validate” option in pyFAI-calib)
- Azimuthal integration tools:
- pyFAI-integrate: the graphical interface for integration (GUI)
- pyFAI-saxs: command line interface for small-angle scattering
- pyFAI-waxs: command line interface for powder difration
- diff_map: diffraction mapping & tomography tool (command line and GUI)
- diff_tomo: diffraction tomography tool (command line only)
- Preprocessing tool: pyFAI-average
- Mask generation tool: pyFAI-drawmask
- Preprocessing tool: detector2nexus
- Calibration tool: pyFAI-calib2
- Calibration tool: pyFAI-calib
- Calibration tool: pyFAI-recalib
- Calibration tool: check_calib
- Calibration tool: MX-calibrate
- Integration tool: pyFAI-integrate
- Integration tool: diff_map
- Integration tool: diff_tomo
- Integration tool: pyFAI-saxs
- Integration tool: pyFAI-waxs